Source code for aiida.engine.processes.ports

# -*- coding: utf-8 -*-
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# Copyright (c), The AiiDA team. All rights reserved.                     #
# This file is part of the AiiDA code.                                    #
#                                                                         #
# The code is hosted on GitHub at https://github.com/aiidateam/aiida_core #
# For further information on the license, see the LICENSE.txt file        #
# For further information please visit http://www.aiida.net               #
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"""AiiDA specific implementation of plumpy Ports and PortNamespaces for the ProcessSpec."""
from __future__ import division
from __future__ import print_function
from __future__ import absolute_import

from plumpy import ports


[docs]class WithNonDb(object): # pylint: disable=useless-object-inheritance """ A mixin that adds support to a port to flag a that should not be stored in the database using the non_db=True flag. The mixins have to go before the main port class in the superclass order to make sure the mixin has the chance to strip out the non_db keyword. """
[docs] def __init__(self, *args, **kwargs): non_db = kwargs.pop('non_db', False) super(WithNonDb, self).__init__(*args, **kwargs) self._non_db = non_db
@property def non_db(self): return self._non_db
[docs]class WithSerialize(object): # pylint: disable=useless-object-inheritance """ A mixin that adds support for a serialization function which is automatically applied on inputs that are not AiiDA data types. """
[docs] def __init__(self, *args, **kwargs): serializer = kwargs.pop('serializer', None) super(WithSerialize, self).__init__(*args, **kwargs) self._serializer = serializer
[docs] def serialize(self, value): """ Serialize the given value if it is not already a Data type and a serializer function is defined :param value: the value to be serialized :returns: a serialized version of the value or the unchanged value """ from aiida.orm import Data if self._serializer is None or isinstance(value, Data): return value return self._serializer(value)
[docs]class InputPort(WithSerialize, WithNonDb, ports.InputPort): """ Sub class of plumpy.InputPort which mixes in the WithSerialize and WithNonDb mixins to support automatic value serialization to database storable types and support non database storable input types as well. """
[docs] def get_description(self): """ Return a description of the InputPort, which will be a dictionary of its attributes :returns: a dictionary of the stringified InputPort attributes """ description = super(InputPort, self).get_description() description['non_db'] = '{}'.format(self.non_db) return description
[docs]class CalcJobOutputPort(ports.OutputPort): """Sub class of plumpy.OutputPort which adds the `_pass_to_parser` attribute."""
[docs] def __init__(self, *args, **kwargs): pass_to_parser = kwargs.pop('pass_to_parser', False) super(CalcJobOutputPort, self).__init__(*args, **kwargs) self._pass_to_parser = pass_to_parser
@property def pass_to_parser(self): return self._pass_to_parser
[docs]class PortNamespace(WithNonDb, ports.PortNamespace): """ Sub class of plumpy.PortNamespace which implements the serialize method to support automatic recursive serialization of a given mapping onto the ports of the PortNamespace. """
[docs] def serialize(self, mapping): """ Serialize the given mapping onto this Portnamespace. It will recursively call this function on any nested PortNamespace or the serialize function on any Ports. :param mapping: a mapping of values to be serialized :returns: the serialized mapping """ if mapping is None: return None result = {} for name, value in mapping.items(): if name in self: port = self[name] result[name] = port.serialize(value) else: result[name] = value return result