Source code for aiida.manage.backup.backup_sqlalchemy

# -*- coding: utf-8 -*-
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# Copyright (c), The AiiDA team. All rights reserved.                     #
# This file is part of the AiiDA code.                                    #
#                                                                         #
# The code is hosted on GitHub at https://github.com/aiidateam/aiida_core #
# For further information on the license, see the LICENSE.txt file        #
# For further information please visit http://www.aiida.net               #
###########################################################################
"""Backup implementation for SqlAlchemy backend."""
from __future__ import division
from __future__ import print_function
from __future__ import absolute_import
import os

import aiida.backends.sqlalchemy
from aiida.backends.sqlalchemy.models.node import DbNode
from aiida.manage.backup.backup_base import AbstractBackup, BackupError
from aiida.common.folders import RepositoryFolder
from aiida.orm.utils.repository import Repository


[docs]class Backup(AbstractBackup): """ Backup for sqlalchemy backend """ _batch_size = 50
[docs] def _query_first_node(self): """ Query first node :return: """ res = aiida.backends.sqlalchemy.get_scoped_session().query(DbNode).order_by(DbNode.ctime).first() if res is None: return list() return [res]
[docs] def _get_query_set_length(self, query_set): """ Get query set length """ return query_set.count()
[docs] def _get_query_sets(self, start_of_backup, backup_end_for_this_round): """ Get Nodes and Worflows query set from start to en d of backup. :param start_of_backup: :param backup_end_for_this_round: :return: """ q_nodes = aiida.backends.sqlalchemy.get_scoped_session().query(DbNode).filter( DbNode.mtime >= start_of_backup).filter(DbNode.mtime <= backup_end_for_this_round) return [q_nodes]
[docs] def _get_query_set_iterator(self, query_set): """ Get query set iterator :param query_set: :return: """ return query_set.yield_per(self._batch_size)
[docs] def _get_source_directory(self, item): """ :param item: :return: """ # pylint: disable=protected-access if isinstance(item, DbNode): source_dir = os.path.normpath(RepositoryFolder(section=Repository._section_name, uuid=item.uuid).abspath) else: # Raise exception self._logger.error("Unexpected item type to backup: %s", type(item)) raise BackupError("Unexpected item type to backup: {}".format(type(item))) return source_dir